Latent-class conditional logit
The latent-class estimator fits a finite mixture of conditional logits by expectation-maximization. Class membership may be represented by aggregate shares or modeled as a function of panel characteristics with fractional multinomial logit.
Most users should start with LCLSpec and lcl.fit. The lower-level
class remains available for direct use.
import lcl
from lcl import FitOptions, Options
options = Options(fit=FitOptions(starts=3))
results = lcl.fit(data, spec, options=options)
# Lower-level orchestration when a persistent model object is useful:
model = lcl.LatentClassConditionalLogit(spec=spec)
results = model.fit(data, options=options)
Pass spec by keyword to the lower-level constructor.
Model
lcl.LatentClassConditionalLogit(num_classes=5, numeraire=None, *, spec=None, numeraire_min_abs=DEFAULT_NEGATIVE_MIN_ABS)
Bases: ChoiceModel
Specification and estimation for latent-class conditional logit models.
This class provides the interface for defining and fitting a latent-class
conditional logit model using an Expectation-Maximization (EM) algorithm. It
inherits from the abstract base class ChoiceModel and manages the data
ingestion, initialization, and iterative optimization of latent taste
parameters and class membership probabilities.
Parameters:
| Name | Type | Description | Default |
|---|---|---|---|
num_classes
|
int
|
The number of discrete latent classes to estimate. |
5
|
numeraire
|
str | None
|
The name of the variable to be used as the numeraire (e.g., price or cost). If specified, its taste parameter is mathematically constrained to be strictly negative across all latent classes via a softplus transformation to ensure theoretically consistent willingness-to-pay calculations. |
None
|
Attributes:
| Name | Type | Description |
|---|---|---|
num_classes |
int
|
The number of discrete latent classes. |
numeraire |
str | None
|
The name of the numeraire variable. |
numeraire_idx |
int | None
|
The column index of the numeraire variable in the expanded design matrix,
resolved during the |
num_vars |
int
|
The total number of alternative-specific variables (taste parameters),
resolved during the |
num_dem_vars |
int
|
The total number of demographic variables, resolved during the |
Create an unfitted latent-class conditional-logit model specification.
Source code in src/lcl/latent_class_conditional_logit.py
fit(data, alts_col=None, cases_col=None, panels_col=None, utility_formula=None, membership_formula=None, choice_col=None, case_varnames=None, dem_varnames=None, variable_labels=None, dems_data=None, options=None, fit_options=None, optimization_options=None, inference=None, diagnostics=None, progress_callback=None)
Fit the latent-class conditional logit model using an EM algorithm.
This method ingests raw data, translates it into strictly contiguous, zero-indexed JAX arrays (PyTrees), and executes the hardware-accelerated EM optimization routine.
Parameters:
| Name | Type | Description | Default |
|---|---|---|---|
data
|
Any
|
The main dataset containing choice situations. Accepts a Polars DataFrame, Pandas DataFrame, or dictionary of arrays. |
required |
alts_col
|
str
|
The name of the column identifying specific alternatives within a choice situation. |
None
|
cases_col
|
str
|
The name of the column grouping observations into distinct choice situations. |
None
|
panels_col
|
str
|
The name of the column mapping choice situations to specific decision-makers (panels). |
None
|
utility_formula
|
str | None
|
Formulaic string for the alternative-specific utility specification.
Examples include |
None
|
membership_formula
|
str | None
|
Right-hand-side Formulaic string for class-membership demographics,
for example |
None
|
choice_col
|
str | None
|
The name of the boolean or binary column indicating chosen alternatives.
Required when |
None
|
case_varnames
|
Sequence[str] | None
|
A list of alternative-specific variables to include in the utility
specification. Required if |
None
|
dem_varnames
|
Sequence[str] | None
|
A list of demographic variables used to predict latent class membership. |
None
|
variable_labels
|
Mapping[str, str] | None
|
Optional mapping from raw DataFrame/model variable names to human-readable labels used in presentation tables. Labels do not change model specification, constraints, prediction inputs, or WTP request names. |
None
|
dems_data
|
Any | None
|
An optional, separate panel-level dataset containing demographics. If
provided, it will be merged with the main |
None
|
fit_options
|
FitOptions | None
|
Preferred EM settings, including multi-start orchestration. |
None
|
optimization_options
|
OptimizationOptions | None
|
Preferred exact-Newton M-step settings. |
None
|
inference
|
InferenceOptions | None
|
Preferred covariance and standard-error settings. |
None
|
diagnostics
|
DiagnosticsOptions | None
|
Diagnostic thresholds and switches. |
None
|
progress_callback
|
callable | None
|
Receives structured hardware, start, EM-step, and completion events. |
None
|
Notes
Case or panel weights are not supported for latent-class estimation and
this method takes no weights argument; passing one is a
:class:TypeError rather than a silent no-op. Weighted estimation is
available for :class:~lcl.conditional_logit.ConditionalLogit.
Returns:
| Type | Description |
|---|---|
class:`~lcl._results.LCLResults`
|
A container holding the estimated parameters, optimization metadata, information criteria, and methods for inference (standard errors, predictions). |
Raises:
| Type | Description |
|---|---|
ValueError
|
If a |
Source code in src/lcl/latent_class_conditional_logit.py
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Results
lcl.results.LCLResults(model_spec, em_vars, estimation_data, em_recursion, converged, inference, estim_time_sec, diagnostics_config=None, em_history=None, optimization_history=None, observed_score_max=float('nan'), score_tol=0.0001, em_criterion_met=False, polish_report=None, cluster_ids=None, num_clusters=None, param_packing=None)
Post-estimation results and inference container.
Computes robust sandwich covariance matrices (clustered at the decision-maker level) and handles the extraction of population-level moments via the Delta Method.
Attributes:
| Name | Type | Description |
|---|---|---|
cov_matrix |
Float64[Array, 'all_params all_params']
|
Covariance of the reported (structural) parameters, aligned row for row
with :meth: |
latent_cov_matrix |
Float64[Array, 'all_params all_params']
|
Covariance in the unconstrained parameterization the optimizer works in. This is the matrix the delta method consumes: target functions apply the softplus transform internally, so its Jacobian is differentiated rather than applied twice. |
caic |
float
|
Consistent Akaike Information Criterion (Bozdogan, 1987). |
bic |
float
|
Bayesian Information Criterion (Schwarz, 1978). |
adjusted_bic |
float
|
Sample-size adjusted BIC (Sclove, 1987). |
Build a latent-class results object and compute inference artifacts.
Parameters:
| Name | Type | Description | Default |
|---|---|---|---|
model_spec
|
Any
|
Fitted model specification. Kept broad to avoid a runtime circular import
with :class: |
required |
em_vars
|
:class:`~lcl._struct.EMVars`
|
Final EM state containing parameters, probabilities, and log likelihood. |
required |
estimation_data
|
:class:`~lcl._struct.Data`
|
Encoded estimation data. |
required |
em_recursion
|
int
|
Number of EM recursions completed before termination. |
required |
converged
|
bool
|
Whether the explicit EM stopping criterion was satisfied. |
required |
inference
|
:class:`~lcl.options.InferenceOptions` | None
|
Covariance and standard-error configuration. |
required |
estim_time_sec
|
float
|
Wall-clock estimation time in seconds. |
required |
diagnostics_config
|
:class:`~lcl.options.DiagnosticsOptions` | None
|
Thresholds and switches for public diagnostics. |
None
|
em_history
|
list[dict[str, Any]] | None
|
EM log-likelihood and class-share history. |
None
|
optimization_history
|
list[dict[str, Any]] | None
|
Final class-level M-step diagnostics. |
None
|
observed_score_max
|
float
|
Largest absolute component of the observed-data score at the reported estimate. Recomputed here when covariance estimation runs. |
float('nan')
|
score_tol
|
float
|
Stationarity tolerance used for the |
1e-4
|
em_criterion_met
|
bool
|
Whether the Aitken EM stopping criterion was satisfied before the iteration cap. |
False
|
polish_report
|
:class:`~lcl._polish.PolishReport` | None
|
Outcome of the observed-data Newton polish. |
None
|
cluster_ids
|
ArrayLike | None
|
Zero-indexed cluster identifier per panel, for clustering coarser than the decision-maker. |
None
|
num_clusters
|
int | None
|
Number of distinct clusters implied by |
None
|
param_packing
|
:class:`~lcl._params.ParamPacking` | None
|
Reuse of the packing built during estimation. |
None
|
Source code in src/lcl/_results.py
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abic
property
Deprecated alias for :attr:adjusted_bic.
convergence
property
Deprecated alias for :attr:converged.
covariance
property
Deprecated alias for :attr:cov_matrix.
covariance_available
property
Report whether a usable covariance matrix was estimated.
__repr__()
Return a compact, human-readable summary of fit quality.
Source code in src/lcl/_results.py
audit_report()
Return a text audit report for replication materials.
Source code in src/lcl/_results.py
beta_summary()
Return population-level coefficient moments with Delta-method SEs.
Returns:
| Type | Description |
|---|---|
DataFrame
|
Raw variables, display labels, mean coefficients, standard deviations across classes, Delta-method standard errors, and class-specific extrema. |
Source code in src/lcl/_results.py
class_coefficients()
Return class-specific structural coefficients.
Returns:
| Type | Description |
|---|---|
DataFrame
|
Long-format table with one row per variable and latent class. The
|
Source code in src/lcl/_results.py
class_shares()
Return aggregate latent-class shares.
Returns:
| Type | Description |
|---|---|
DataFrame
|
One row per latent class with aggregate class share and effective panel mass. |
Source code in src/lcl/_results.py
classification_diagnostics()
Summarize posterior separation and modal classification by class.
Source code in src/lcl/_results.py
convergence_report()
Return a compact convergence and diagnostic report.
Source code in src/lcl/_results.py
diagnose()
diagnostics()
Return structured model diagnostics.
Source code in src/lcl/_results.py
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loglik(data, dems_data=None, *, per_panel=False)
Score observed choices with the fitted empirical specification.
The fitted encoder is reused, so Formulaic categorical levels and expanded columns retain their training-time meaning.
Parameters:
| Name | Type | Description | Default |
|---|---|---|---|
data
|
object
|
Long-format data containing one observed choice per case. |
required |
dems_data
|
object | None
|
Optional panel-level demographics joined by the fitted panel ID column. |
None
|
per_panel
|
bool
|
Return a panel-level table instead of the total log likelihood. |
False
|
Returns:
| Type | Description |
|---|---|
float or DataFrame
|
Total log likelihood when |
Source code in src/lcl/_results.py
membership_coefficients()
Return nonbaseline class-membership coefficients with standard errors.
Class 0 is the reference category and therefore has no separately estimated membership coefficients.
Source code in src/lcl/_results.py
parameter_names()
Return names aligned with rows and columns of cov_matrix.
Source code in src/lcl/_results.py
predict(data=None, *, X=None, alts=None, cases=None, panels=None, dems=None, dem_panel_ids=None, past_choices=None, dems_data=None, past_choices_dems_data=None, panel_weights=None)
Generate out-of-sample latent-class predictions.
Prediction can be requested either with raw tabular data, which is encoded
using the fitted model specification, or with already-constructed arrays.
When historical choices are supplied through past_choices, class
membership probabilities are updated with Bayes' rule before computing
counterfactual choice probabilities, consumer surplus, and willingness to pay.
Parameters:
| Name | Type | Description | Default |
|---|---|---|---|
X
|
ArrayLike | None
|
Alternative-specific design matrix for array-style prediction. Ignored
when |
None
|
alts
|
ArrayLike | None
|
Alternative identifiers aligned to rows of |
None
|
cases
|
ArrayLike | None
|
Choice-situation identifiers aligned to rows of |
None
|
panels
|
ArrayLike | None
|
Decision-maker identifiers aligned to rows of |
None
|
dems
|
ArrayLike | None
|
Panel-level demographics for array-style prediction. When
|
None
|
dem_panel_ids
|
ArrayLike | None
|
Panel IDs aligned with rows of |
None
|
past_choices
|
PastChoicesData or tabular data
|
Historical choices used to condition latent-class membership probabilities.
Pass a :class: |
None
|
data
|
object | None
|
Long-format prediction data. If provided, the fitted encoder parses this data using the original empirical specification. |
None
|
dems_data
|
object | None
|
Optional panel-level demographics to merge into |
None
|
past_choices_dems_data
|
object | None
|
Optional panel-level demographics to merge into tabular |
None
|
Returns:
| Type | Description |
|---|---|
class:`~lcl._prediction.LCLPrediction`
|
Prediction results, including choice probabilities, consumer surplus, panel-level WTP values, and the class probabilities used for prediction. |
Raises:
| Type | Description |
|---|---|
ValueError
|
If required prediction identifiers are missing, if fitted latent-class
parameters are unavailable, or if |
Source code in src/lcl/_results.py
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spec_summary()
Return a human-readable model specification summary.
Source code in src/lcl/_results.py
summarize(num_decimals=3, *, show=True)
summarize_betas(header=('Variable', "Means (\\beta's)", "Standard deviations (\\sigma's)"), num_decimals=3, *, show=True)
Print and return population-level coefficient moments.
Parameters:
| Name | Type | Description | Default |
|---|---|---|---|
header
|
tuple[str, str, str]
|
Column labels used in the printed LaTeX and terminal tables. |
("Variable", ...)
|
num_decimals
|
int
|
Number of decimal places used in printed tables. |
3
|
show
|
bool
|
Emit LaTeX and terminal renderings. Set to |
True
|
Returns:
| Type | Description |
|---|---|
DataFrame
|
Tidy coefficient-moment table. The |
Source code in src/lcl/_results.py
Held-out scoring
LCLResults.loglik transforms observed choices with the fitted encoder:
The panel-level form returns original panel IDs and their log-likelihood contributions. It is also the scoring path used by cross-validation.
Summary methods return Polars frames. Pass show=False to suppress their LaTeX
and terminal renderings:
summary = results.summarize_betas(show=False)
class_coefficients = results.class_coefficients() # includes std_error
membership = results.membership_coefficients() # class 0 is the reference
classification = results.classification_diagnostics()
parameter_names() labels covariance rows and columns exactly. converged,
cov_matrix, and adjusted_bic are the canonical names shared with conditional
logit; convergence, covariance, and abic are deprecated aliases.
Diagnostics
lcl.results.LCLDiagnostics(frame)
Structured diagnostics for a fitted latent-class model.
Parameters:
| Name | Type | Description | Default |
|---|---|---|---|
frame
|
DataFrame
|
Diagnostic checks with at least |
required |
Store diagnostic checks.
Source code in src/lcl/_diagnostics.py
__repr__()
print()
Print a compact diagnostics table.
Prediction and counterfactuals
Tabular prediction is preferred because it reuses the fitted encoder:
prediction = results.predict(data=counterfactual_data)
shares = prediction.market_shares()
aggregate = prediction.aggregate_elasticities(["cost", "time"])
Pass panel_weights= to predict as a panel-keyed mapping, a prediction-data
column name, or a vector in sorted prediction-panel order. WTP supports
se="delta", se="bootstrap" (an asymptotic parametric bootstrap), and
se="none". Posterior-conditioned WTP uncertainty is refused because the
current implementation does not differentiate through the Bayesian update.
Surplus frames include surplus_units (money with a numeraire, otherwise
utils). Use baseline_prediction.surplus_change(counterfactual_prediction)
for the identified welfare change rather than comparing unnormalised levels.
For array-style prediction, supply dem_panel_ids with dems so demographic
rows can be validated and reordered. Without those IDs, demographic rows must
follow sorted unique panel-ID order.
lcl.results.LCLPrediction(predicted_probs_df, surplus_df, wtp_alt_vars_by_panel_df, predict_data, results, class_probs_by_panel=None, class_probabilities_source='prior', partition_data_df=None, original_alts=None, original_cases=None, original_panels=None, raw_prediction_data=None, panel_weights=None, past_diff_unchosen_chosen=None, past_data=None)
Bases: _PredictionBase
Latent-class prediction with partitioned WTP inference.
Source code in src/lcl/_prediction.py
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compute_wtp(*wtp_requests, partition_data=None, panel_col='panels', num_decimals=4, class_probabilities='stored', se='delta', bootstrap_draws=500, bootstrap_seed=0, show=True)
Compute the Marginal Willingness-to-Pay (WTP) across demographic partitions.
Evaluates the ratio of the target parameter to the negative cost parameter (marginal utility of income) for dynamically defined subsets of decision-makers. Outputs formatted LaTeX and terminal summary tables, including analytical standard errors derived via the Delta Method.
Parameters:
| Name | Type | Description | Default |
|---|---|---|---|
*wtp_requests
|
WTPRequest | Iterable[WTPRequest]
|
One or more configuration objects specifying the target variable, the demographic partitioning variable, and the binning strategy (e.g., quintiles, categorical, custom breaks, or a dummy-coded categorical factor). |
()
|
partition_data
|
object | None
|
Optional panel-level or long-format tabular data containing partitioning variables that were not included in the fitted class-membership specification. Values must be constant within each panel. |
None
|
panel_col
|
str
|
Panel identifier column in |
"panels"
|
num_decimals
|
int
|
Number of decimal places used in printed WTP tables. |
4
|
class_probabilities
|
(stored, prior, posterior)
|
Class-membership probabilities used for WTP/tradeoff point estimates.
|
"stored"
|
se
|
(delta, bootstrap, none)
|
Standard-error method. Delta-method and asymptotic parametric-bootstrap
standard errors are available for prior class probabilities.
When the prediction used |
"delta"
|
bootstrap_draws
|
int
|
Number of asymptotic parameter draws for |
500
|
bootstrap_seed
|
int
|
Reproducible random seed for parametric-bootstrap draws. |
0
|
show
|
bool
|
Emit LaTeX and terminal renderings for each request. |
True
|
Returns:
| Type | Description |
|---|---|
dict[str, DataFrame]
|
Summary tables keyed by their printed titles. Each table preserves
raw variable names in |
Raises:
| Type | Description |
|---|---|
ValueError
|
If the parent model was not estimated with a specified numeraire constraint. |
Source code in src/lcl/_prediction.py
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denominator_diagnostics()
Return denominator diagnostics for WTP/tradeoff ratios.
Source code in src/lcl/_prediction.py
tradeoff(*wtp_requests, **kwargs)
Alias for :meth:compute_wtp with more neutral terminology.
wtp_by_class(target=None)
Return class-specific WTP/tradeoff ratios.
Parameters:
| Name | Type | Description | Default |
|---|---|---|---|
target
|
str | None
|
Optional target variable to filter. By default, all non-numeraire alternative-specific variables are returned. |
None
|
Returns:
| Type | Description |
|---|---|
DataFrame
|
Class-specific ratios |
Source code in src/lcl/_prediction.py
lcl.options.WTPRequest(alt_var, demographic_var, partition_type, bins=None, dummy_vars=None, dummy_labels=None, base_category='base')
dataclass
Configuration for a marginal willingness-to-pay summary.
__post_init__()
Normalize and validate the partition request.
Source code in src/lcl/options.py
lcl.options.PartitionType
Bases: StrEnum
Supported binning strategies for WTP analysis.
lcl.options.PastChoicesData(X, y, alts, cases, panels, dems=None, dem_panel_ids=None)
dataclass
Array-style historical choices used to update class membership.